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Cancer is often caused by improper function of a few proteins, and sometimes it takes only a few proteins to malfunction to cause drastic changes in cells. Here the authors look at the genes that were mutated in patients with a type of pancreatic cancer to identify proteins that are important in causing cancer. They also determined which proteins currently lack effective treatment, and suggest that certain proteins (named KRAS, CDKN2A, and RBBP8) are the most important candidates for developing drugs to treat pancreatic cancer.

Given an association between nicotine addiction and gene expression, we hypothesized that expression of genes commonly associated with smoking status would have variable expression between smokers and non-smokers. To test whether gene expression varies between smokers and non-smokers, we analyzed two publicly-available datasets that profiled RNA gene expression from brain (nucleus accumbens) and lung tissue taken from patients identified as smokers or non-smokers. We discovered statistically significant differences in expression of dozens of genes between smokers and non-smokers. To test whether gene expression can be used to predict whether a patient is a smoker or non-smoker, we used gene expression as the training data for a logistic regression or random forest classification model. The random forest classifier trained on lung tissue data showed the most robust results, with area under curve (AUC) values consistently between 0.82 and 0.93. Both models trained on nucleus accumbens data had poorer performance, with AUC values consistently between 0.65 and 0.7 when using random forest. These results suggest gene expression can be used to predict smoking status using traditional machine learning models. Additionally, based on our random forest model, we proposed KCNJ3 and TXLNGY as two candidate markers of smoking status. These findings, coupled with other genes identified in this study, present promising avenues for advancing applications related to the genetic foundation of smoking-related characteristics.

The authors test the usefulness of zinc oxide microparticles relative to zinc oxide nanoparticles as antibacterial agents.

In this study, the authors investigate the relationship between iron/hydrogen ratio [Fe/H] of a type of variable stars commonly used as reference points RR Lyrae stars and their light curves to see if one can determine the composition of these stars solely by measuring their light curve characteristics.

This study explores the interaction between precocene II and trichocethecene 3-O-acetyltransferase using molecular docking simulations. Computational analysis identified several potential binding sites on the enzyme surface and predicted favorable ligand-protein interactions involving key residues. These findings provide insight into how precocene II may interact with this enzyme and demonstrate the use of computational approaches to explore potential antifungal mechanisms.

The authors looked at whether retinal features, specifically lens clarity, optic nerve cupping, and hyperreflective foci, can serve as biomarkers for neuro-ophthalmological diseases, which share pathological mechanisms with neurodegeneration and may indicate broader neurological risk. Using multimodal clinical data and machine learning, they investigated the potential of retinal imaging as a complementary diagnostic tool for more accurate and accessible detection of neurological disorders.

The authors looked at energy efficient ways to generate small nitrogenous compounds.

This study explores auxin signaling in Chlorella vulgaris, a green alga with potential for sustainable biofuel and food production. Evidence from protoplast swelling experiments suggests that C. vulgaris secretes auxin and possesses auxin import proteins, highlighting previously uncharacterized signaling pathways. These findings could support more efficient cultivation and resource extraction strategies.

Soil stores three times more carbon than the atmosphere, making small changes in its storage and release crucial for carbon cycling and climate models. This study examined the impact of the 2020 California Silverado Fire on pyrogenic carbon (PyC) deposits using nitrogen and carbon isotopes as proxies. While the results showed significant variability in δ¹⁵N, δ¹³C, total carbon, and total nitrogen across sites, they did not support the hypothesis that wildfire increases δ¹⁵N while keeping δ¹³C constant, emphasizing the need for location-based controls when using δ¹⁵N to track PyC.

The authors analyze political endorsement patterns and impacts from the 2018 and 2020 midterm elections and find that such endorsements may be predictable based on the ideological and demographic factors of the endorser.